I have run my theme through WordPress theme checker to see if it can be submitted to WordPress.org. I encountered this error:

REQUIRED: Could not find wp_link_pages. See: wp_link_pages

But this is not true. I am using a custom function wp_my_own_link_pages() which is a replacement for wp_link_pages(). It generates pagination with a compatible HTML structure for the theme.

Did I miss something required? How can I make this work?